------- SECIS element -- id:1 -- grade:B ----
 Chromosome = CM007935.1:subseq_31432276,109853_ Strand = - Positions = 92993 - 92929
 Found by:  Infernal (score=20.07) Covels (score=10.13)
 Stem2 length = 10   Apical loop length = 11   Insertion in stem2 = 0, 0
 Free Energy = -13.9

         ..(((((((.......(((((((((((((((...............)))))))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccuggcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuuuuucaugaccggc
         ...({((((---....{[[(((((((((((------...........)))))))))))]]}..--.--.))))})...
 target  UGUGUUUGA---ACCAUGAGAGUUUUUUGG------CGUUGUGGACACCAAGAAACUUGAUGC--U--CUCAACCUGC
                         ****                                     ****                 

------- SECIS element -- id:2 -- grade:B ----
 Chromosome = CM007935.1:subseq_31432276,109853_ Strand = + Positions = 38549 - 38633
 Found by:  Infernal (score=11.9) Covels (score=10.41)
 Stem2 length = 10   Apical loop length = 13   Insertion in stem2 = 1, 0
 Free Energy = -4.32

         ..(((((((...............((((((((((.(((((...............))))))))))))))).........)))))))..
 model   uucggucaugcg--------UuaAUGAcGgccug-gcccuAAAcCcuuuuuggggcgggccaggcCuGAUGuuu-uuucaugaccggc
         ..((({(((...............{[[{{(((((.(((((.....--........))))))))))}}]]}.....-...)))})))..
 target  GUGAUUAUUUUUUUUAAUAAGGUAUGACUUUACCCACAUUAAAAC--UGGAUGGAAAUGUGGUAACUGACAGUCA-CUCAAUUAUCCC
                                 ****            ^^^                       ****                  

------- SECIS element -- id:3 -- grade:C ----
 Chromosome = CM007935.1:subseq_31432276,109853_ Strand = + Positions = 31551 - 31622
 Found by:  Infernal (score=11.88) Covels (score=1.25)
 Stem2 length = 8   Apical loop length = 14   Insertion in stem2 = 0, 0
 Free Energy = -17.8

         ..(((((((.......((((((((((.(((((..................))))).))))))))))........)))))))..
 model   uucggucaugcgUuaAUGAcGgccug-gcccuAAAcC---cuuuuuggggcgggc-caggcCuGAUGuuuuuucaugaccggc
         (((((((((---....([[[((({(({({((------(............)))})}))})))]]])..--....)))))))))
 target  UUAGUGUAC---AACAUGAAGUUUCCCCCUC------CGUGUCAAUAAGGGGAAGAGGCAGCGGAGCA--GUGGGUGCACUGA
                         ****                                          ****